1st Single Cell & Spatial Omics Hackathon
Innovate in Single-Cell and Spatial Omics Data Analysis
Join SCSOK ZulipAbout the Hackathon
Welcome to the 1st Single Cell & Spatial Omics Hackathon, to be held at the Oceans and Fisheries HRD Institute in Gijang, Busan. This exciting event will bring together experts, researchers, and data scientists in Korea in a collaborative setting to innovate in the fields of single-cell and spatial omics data analysis.
By joining this hackathon, you'll have the chance to work with peers, engage with real-world datasets, and develop cutting-edge tools that provide deep insights into single-cell and spatially resolved biological data.
Hackathon?
A hackathon is a collaborative event in which participants work intensively on a project, typically software or hardware, for a defined period of time. The goal of a hackathon is to create usable software or hardware with the goal of solving a problem or creating a new product.
Unfortunately, especially in Korea, Hackathon is often misunderstood as just a competition and not as a collaborative event. We hope to change this perception by organizing this event.
The 1st Single Cell & Spatial Omics Hackathon will focus on developing tools and methods for analyzing single-cell and spatial omics data. Participants will work in teams to develop innovative solutions to complex problems in the field.
Agenda
Spatial Transcriptomics
- Cell segmentation of high resolution ST data (e.g., Visium HD)
- Neighbor-specific alteration of gene expression
- Tissue territory/domain analysis
- Integration
Single-cell Transcriptomics
- Application of AI, e.g., GPTs
- Lineage tracing
- Sane method for HVG selection
- Genotype to phenotype inference
Organizing Committee
Junil Kim
Soongsil University
Jeongbin Park
Pusan National University
Heetak Lee
Institute for Basic Science
Registration
Please note that this is an invitation-only event. If you are interested, please reach out on the Zulip `hackathon` channel.